[
{
"study_accession": "SDY56",
"study_title": "Systems Biology of 2010 trivalent Influenza vaccine (TIV) in young and elderly (see companion study SDY61 2007, SDY270 2009, SDY119 2011)",
"actual_enrollment": 70,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, microRNA profiling assay, Transcription profiling by array",
"authors": "Nakaya HI, Hagan T, Duraisingham SS, Lee EK, Kwissa M, Rouphael N, Frasca D, Gersten M, Mehta AK, Gaujoux R, Li GM, Gupta S, Ahmed R, Mulligan MJ, Shen-Orr S, Blomberg BB, Subramaniam S, Pulendran B",
"publication_title": "Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures.",
"pubmed_id": "26682988"
},
{
"study_accession": "SDY58",
"study_title": "Defining signatures for immune responsiveness by functional systems immunology",
"actual_enrollment": 135,
"measurement_technique": "ELISA, Flow Cytometry, Meso Scale Discovery ECL, Transcription profiling by array",
"authors": "Ohta M, Kanai S, Kitani K",
"publication_title": "The order of hepatic cytotoxicity of bile salts in vitro does not agree with that examined in vivo in rats.",
"pubmed_id": "2355795"
},
{
"study_accession": "SDY58",
"study_title": "Defining signatures for immune responsiveness by functional systems immunology",
"actual_enrollment": 135,
"measurement_technique": "ELISA, Flow Cytometry, Meso Scale Discovery ECL, Transcription profiling by array",
"authors": "Yao Y, Strauss-Albee DM, Zhou JQ, Malawista A, Garcia MN, Murray KO, Blish CA, Montgomery RR",
"publication_title": "The natural killer cell response to West Nile virus in young and old individuals with or without a prior history of infection.",
"pubmed_id": "28235099"
},
{
"study_accession": "SDY61",
"study_title": "Systems Biology of 2007 Influenza Vaccination in Humans (See companion studies SDY269 2008 / SDY270 2009 / SDY271 Role for CaMKIV in the Regulation of Antibody Responses to Influenza Vaccine)",
"actual_enrollment": 12,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Q-PCR, Transcription profiling by array",
"authors": "Nakaya HI, Wrammert J, Lee EK, Racioppi L, Marie-Kunze S, Haining WN, Means AR, Kasturi SP, Khan N, Li GM, McCausland M, Kanchan V, Kokko KE, Li S, Elbein R, Mehta AK, Aderem A, Subbarao K, Ahmed R, Pulendran B",
"publication_title": "Systems biology of vaccination for seasonal influenza in humans.",
"pubmed_id": "21743478"
},
{
"study_accession": "SDY61",
"study_title": "Systems Biology of 2007 Influenza Vaccination in Humans (See companion studies SDY269 2008 / SDY270 2009 / SDY271 Role for CaMKIV in the Regulation of Antibody Responses to Influenza Vaccine)",
"actual_enrollment": 12,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Q-PCR, Transcription profiling by array",
"authors": "Nakaya HI, Hagan T, Duraisingham SS, Lee EK, Kwissa M, Rouphael N, Frasca D, Gersten M, Mehta AK, Gaujoux R, Li GM, Gupta S, Ahmed R, Mulligan MJ, Shen-Orr S, Blomberg BB, Subramaniam S, Pulendran B",
"publication_title": "Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures.",
"pubmed_id": "26682988"
},
{
"study_accession": "SDY63",
"study_title": "Immunologic and genomic signatures of influenza vaccine response - 2010 (see companion studies SDY400, SDY404, SDY520)",
"actual_enrollment": 49,
"measurement_technique": "Hemagglutination Inhibition, Transcription profiling by array",
"authors": "Avey S, Mohanty S, Wilson J, Zapata H, Joshi SR, Siconolfi B, Tsang S, Shaw AC, Kleinstein SH",
"publication_title": "Multiple network-constrained regressions expand insights into influenza vaccination responses.",
"pubmed_id": "28881994"
},
{
"study_accession": "SDY63",
"study_title": "Immunologic and genomic signatures of influenza vaccine response - 2010 (see companion studies SDY400, SDY404, SDY520)",
"actual_enrollment": 49,
"measurement_technique": "Hemagglutination Inhibition, Transcription profiling by array",
"authors": "Meng H, Yaari G, Bolen CR, Avey S, Kleinstein SH",
"publication_title": "Gene set meta-analysis with Quantitative Set Analysis for Gene Expression (QuSAGE).",
"pubmed_id": "30939133"
},
{
"study_accession": "SDY67",
"study_title": "Bioinformatics Approach to 2010-2011 TIV Influenza A/H1N1 Vaccine Immune Profiling",
"actual_enrollment": 159,
"measurement_technique": "Cell Culture, DNA methylation profiling assay, ELISPOT, Flow Cytometry, Hemagglutination Inhibition, Mass Spectrometry, Meso Scale Discovery ECL, PCR, Q-PCR, RNA sequencing, Virus Neutralization",
"authors": "Haralambieva IH, Painter SD, Kennedy RB, Ovsyannikova IG, Lambert ND, Goergen KM, Oberg AL, Poland GA",
"publication_title": "The impact of immunosenescence on humoral immune response variation after influenza A/H1N1 vaccination in older subjects.",
"pubmed_id": "25816015"
},
{
"study_accession": "SDY67",
"study_title": "Bioinformatics Approach to 2010-2011 TIV Influenza A/H1N1 Vaccine Immune Profiling",
"actual_enrollment": 159,
"measurement_technique": "Cell Culture, DNA methylation profiling assay, ELISPOT, Flow Cytometry, Hemagglutination Inhibition, Mass Spectrometry, Meso Scale Discovery ECL, PCR, Q-PCR, RNA sequencing, Virus Neutralization",
"authors": "Zimmermann MT, Oberg AL, Grill DE, Ovsyannikova IG, Haralambieva IH, Kennedy RB, Poland GA",
"publication_title": "System-Wide Associations between DNA-Methylation, Gene Expression, and Humoral Immune Response to Influenza Vaccination.",
"pubmed_id": "27031986"
},
{
"study_accession": "SDY67",
"study_title": "Bioinformatics Approach to 2010-2011 TIV Influenza A/H1N1 Vaccine Immune Profiling",
"actual_enrollment": 159,
"measurement_technique": "Cell Culture, DNA methylation profiling assay, ELISPOT, Flow Cytometry, Hemagglutination Inhibition, Mass Spectrometry, Meso Scale Discovery ECL, PCR, Q-PCR, RNA sequencing, Virus Neutralization",
"authors": "Ovsyannikova IG, Oberg AL, Kennedy RB, Zimmermann MT, Haralambieva IH, Goergen KM, Grill DE, Poland GA",
"publication_title": "Gene signatures related to HAI response following influenza A/H1N1 vaccine in older individuals.",
"pubmed_id": "27441275"
},
{
"study_accession": "SDY67",
"study_title": "Bioinformatics Approach to 2010-2011 TIV Influenza A/H1N1 Vaccine Immune Profiling",
"actual_enrollment": 159,
"measurement_technique": "Cell Culture, DNA methylation profiling assay, ELISPOT, Flow Cytometry, Hemagglutination Inhibition, Mass Spectrometry, Meso Scale Discovery ECL, PCR, Q-PCR, RNA sequencing, Virus Neutralization",
"authors": "Racle J, de Jonge K, Baumgaertner P, Speiser DE, Gfeller D",
"publication_title": "Simultaneous enumeration of cancer and immune cell types from bulk tumor gene expression data.",
"pubmed_id": "29130882"
},
{
"study_accession": "SDY74",
"study_title": "Systems Biology Approach to Analysis of 2010-11 TIV Fluzone Influenza Vaccine Response in Healthy Individuals (see companion studies SDY301, SDY296)",
"actual_enrollment": 12,
"measurement_technique": "Flow Cytometry, Transcription profiling by array",
"authors": "Bentebibel SE, Lopez S, Obermoser G, Schmitt N, Mueller C, Harrod C, Flano E, Mejias A, Albrecht RA, Blankenship D, Xu H, Pascual V, Banchereau J, Garcia-Sastre A, Palucka AK, Ramilo O, Ueno H",
"publication_title": "Induction of ICOS+CXCR3+CXCR5+ TH cells correlates with antibody responses to influenza vaccination.",
"pubmed_id": "23486778"
},
{
"study_accession": "SDY89",
"study_title": "Systems Biology Analysis of the response to Licensed Hepatitis B Vaccine (Engerix-B) (see companion study SDY690)",
"actual_enrollment": 50,
"measurement_technique": "Flow Cytometry, Transcription profiling by array, Virus Neutralization",
"authors": "Sablan BP, Kim DJ, Barzaga NG, Chow WC, Cho M, Ahn SH, Hwang SG, Lee JH, Namini H, Heyward WL",
"publication_title": "Demonstration of safety and enhanced seroprotection against hepatitis B with investigational HBsAg-1018 ISS vaccine compared to a licensed hepatitis B vaccine.",
"pubmed_id": "22342916"
},
{
"study_accession": "SDY89",
"study_title": "Systems Biology Analysis of the response to Licensed Hepatitis B Vaccine (Engerix-B) (see companion study SDY690)",
"actual_enrollment": 50,
"measurement_technique": "Flow Cytometry, Transcription profiling by array, Virus Neutralization",
"authors": "Heyward WL, Kyle M, Blumenau J, Davis M, Reisinger K, Kabongo ML, Bennett S, Janssen RS, Namini H, Martin JT",
"publication_title": "Immunogenicity and safety of an investigational hepatitis B vaccine with a Toll-like receptor 9 agonist adjuvant (HBsAg-1018) compared to a licensed hepatitis B vaccine in healthy adults 40-70 years of age.",
"pubmed_id": "23727002"
},
{
"study_accession": "SDY89",
"study_title": "Systems Biology Analysis of the response to Licensed Hepatitis B Vaccine (Engerix-B) (see companion study SDY690)",
"actual_enrollment": 50,
"measurement_technique": "Flow Cytometry, Transcription profiling by array, Virus Neutralization",
"authors": "Janssen JM, Jackson S, Heyward WL, Janssen RS",
"publication_title": "Immunogenicity of an investigational hepatitis B vaccine with a toll-like receptor 9 agonist adjuvant (HBsAg-1018) compared with a licensed hepatitis B vaccine in subpopulations of healthy adults 18-70 years of age.",
"pubmed_id": "26067185"
},
{
"study_accession": "SDY89",
"study_title": "Systems Biology Analysis of the response to Licensed Hepatitis B Vaccine (Engerix-B) (see companion study SDY690)",
"actual_enrollment": 50,
"measurement_technique": "Flow Cytometry, Transcription profiling by array, Virus Neutralization",
"authors": "Jackson S, Lentino J, Kopp J, Murray L, Ellison W, Rhee M, Shockey G, Akella L, Erby K, Heyward WL, Janssen RS",
"publication_title": "Immunogenicity of a two-dose investigational hepatitis B vaccine, HBsAg-1018, using a toll-like receptor 9 agonist adjuvant compared with a licensed hepatitis B vaccine in adults.",
"pubmed_id": "29289383"
},
{
"study_accession": "SDY111",
"study_title": "VZV vaccination in the elderly SLVP020",
"actual_enrollment": 48,
"measurement_technique": "ELISA, ELISPOT, HLA Typing, Luminex xMAP, Transcription profiling by array",
"authors": "Wang C, Liu Y, Cavanagh MM, Le Saux S, Qi Q, Roskin KM, Looney TJ, Lee JY, Dixit V, Dekker CL, Swan GE, Goronzy JJ, Boyd SD",
"publication_title": "B-cell repertoire responses to varicella-zoster vaccination in human identical twins.",
"pubmed_id": "25535378"
},
{
"study_accession": "SDY112",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2011 (See companion studies SDY311 2010 / SDY312 2009 / SDY314 2008 / SDY315 2012)",
"actual_enrollment": 93,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Transcription profiling by array",
"authors": "Furman D, Chang J, Lartigue L, Bolen CR, Haddad F, Gaudilliere B, Ganio EA, Fragiadakis GK, Spitzer MH, Douchet I, Daburon S, Moreau JF, Nolan GP, Blanco P, Dechanet-Merville J, Dekker CL, Jojic V, Kuo CJ, Davis MM, Faustin B",
"publication_title": "Expression of specific inflammasome gene modules stratifies older individuals into two extreme clinical and immunological states.",
"pubmed_id": "28092664"
},
{
"study_accession": "SDY112",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2011 (See companion studies SDY311 2010 / SDY312 2009 / SDY314 2008 / SDY315 2012)",
"actual_enrollment": 93,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Transcription profiling by array",
"authors": "Blazkova J, Gupta S, Liu Y, Gaudilliere B, Ganio EA, Bolen CR, Saar-Dover R, Fragiadakis GK, Angst MS, Hasni S, Aghaeepour N, Stevenson D, Baldwin N, Anguiano E, Chaussabel D, Altman MC, Kaplan MJ, Davis MM, Furman D",
"publication_title": "Multicenter Systems Analysis of Human Blood Reveals Immature Neutrophils in Males and During Pregnancy.",
"pubmed_id": "28179497"
},
{
"study_accession": "SDY112",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2011 (See companion studies SDY311 2010 / SDY312 2009 / SDY314 2008 / SDY315 2012)",
"actual_enrollment": 93,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Transcription profiling by array",
"authors": "Alpert A, Pickman Y, Leipold M, Rosenberg-Hasson Y, Ji X, Gaujoux R, Rabani H, Starosvetsky E, Kveler K, Schaffert S, Furman D, Caspi O, Rosenschein U, Khatri P, Dekker CL, Maecker HT, Davis MM, Shen-Orr SS",
"publication_title": "A clinically meaningful metric of immune age derived from high-dimensional longitudinal monitoring.",
"pubmed_id": "30842675"
},
{
"study_accession": "SDY112",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2011 (See companion studies SDY311 2010 / SDY312 2009 / SDY314 2008 / SDY315 2012)",
"actual_enrollment": 93,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Transcription profiling by array",
"authors": "Tomic A, Tomic I, Dekker CL, Maecker HT, Davis MM",
"publication_title": "The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.",
"pubmed_id": "31636302"
},
{
"study_accession": "SDY113",
"study_title": "Plasmablast response to inactivated and live attenuated influenza vaccines (TIV3/TIV3 ID/LAIV) SLVP021 2011",
"actual_enrollment": 70,
"measurement_technique": "CyTOF, ELISA, ELISPOT, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Transcription profiling by array",
"authors": "Sasaki S, Holmes TH, Albrecht RA, Garcia-Sastre A, Dekker CL, He XS, Greenberg HB",
"publication_title": "Distinct cross-reactive B-cell responses to live attenuated and inactivated influenza vaccines.",
"pubmed_id": "24676204"
},
{
"study_accession": "SDY113",
"study_title": "Plasmablast response to inactivated and live attenuated influenza vaccines (TIV3/TIV3 ID/LAIV) SLVP021 2011",
"actual_enrollment": 70,
"measurement_technique": "CyTOF, ELISA, ELISPOT, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Transcription profiling by array",
"authors": "Tomic A, Tomic I, Dekker CL, Maecker HT, Davis MM",
"publication_title": "The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.",
"pubmed_id": "31636302"
},
{
"study_accession": "SDY144",
"study_title": "Systems Biology Approach to Study Influenza Vaccine 2011-12 in Healthy Children (see companion studies SDY364, SDY368, SDY387, SDY522)",
"actual_enrollment": 17,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Transcription profiling by array, Virus Neutralization",
"authors": "Cao RG, Suarez NM, Obermoser G, Lopez SM, Flano E, Mertz SE, Albrecht RA, Garcia-Sastre A, Mejias A, Xu H, Qin H, Blankenship D, Palucka K, Pascual V, Ramilo O",
"publication_title": "Differences in antibody responses between trivalent inactivated influenza vaccine and live attenuated influenza vaccine correlate with the kinetics and magnitude of interferon signaling in children.",
"pubmed_id": "24495909"
},
{
"study_accession": "SDY162",
"study_title": "Immunologic and genomic signatures of response to Hepatitis C Virus infection.",
"actual_enrollment": 20,
"measurement_technique": "Transcription profiling by array",
"authors": "Qian F, Bolen CR, Jing C, Wang X, Zheng W, Zhao H, Fikrig E, Bruce RD, Kleinstein SH, Montgomery RR",
"publication_title": "Impaired toll-like receptor 3-mediated immune responses from macrophages of patients chronically infected with hepatitis C virus.",
"pubmed_id": "23220997"
},
{
"study_accession": "SDY180",
"study_title": "Systems scale interactive exploration reveals quantitative and qualitative differences in response to 2009-2010 Fluzone influenza vaccine and pneumococcal vaccine",
"actual_enrollment": 46,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Nanostring, Neutralizing Antibody Titer Assay, Transcription profiling by array, Virus Neutralization",
"authors": "Obermoser G, Presnell S, Domico K, Xu H, Wang Y, Anguiano E, Thompson-Snipes L, Ranganathan R, Zeitner B, Bjork A, Anderson D, Speake C, Ruchaud E, Skinner J, Alsina L, Sharma M, Dutartre H, Cepika A, Israelsson E, Nguyen P, Nguyen QA, Harrod AC, Zurawski SM, Pascual V, Ueno H, Nepom GT, Quinn C, Blankenship D, Palucka K, Banchereau J, Chaussabel D",
"publication_title": "Systems scale interactive exploration reveals quantitative and qualitative differences in response to influenza and pneumococcal vaccines.",
"pubmed_id": "23601689"
},
{
"study_accession": "SDY183",
"study_title": "Effect of age on 2008/2009 trivalent influenza vaccine response",
"actual_enrollment": 76,
"measurement_technique": "Protein microarray",
"authors": "Furman D, Jojic V, Kidd B, Shen-Orr S, Price J, Jarrell J, Tse T, Huang H, Lund P, Maecker HT, Utz PJ, Dekker CL, Koller D, Davis MM",
"publication_title": "Apoptosis and other immune biomarkers predict influenza vaccine responsiveness.",
"pubmed_id": "23591775"
},
{
"study_accession": "SDY183",
"study_title": "Effect of age on 2008/2009 trivalent influenza vaccine response",
"actual_enrollment": 76,
"measurement_technique": "Protein microarray",
"authors": "Price JV, Jarrell JA, Furman D, Kattah NH, Newell E, Dekker CL, Davis MM, Utz PJ",
"publication_title": "Characterization of influenza vaccine immunogenicity using influenza antigen microarrays.",
"pubmed_id": "23734205"
},
{
"study_accession": "SDY202",
"study_title": "Heterovariant cross-reactive B-cell responses induced by the 2009 pandemic influenza virus A subtype H1N1 vaccine SLVP021",
"actual_enrollment": 79,
"measurement_technique": "ELISA, ELISPOT, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP",
"authors": "He XS, Sasaki S, Baer J, Khurana S, Golding H, Treanor JJ, Topham DJ, Sangster MY, Jin H, Dekker CL, Subbarao K, Greenberg HB",
"publication_title": "Heterovariant cross-reactive B-cell responses induced by the 2009 pandemic influenza virus A subtype H1N1 vaccine.",
"pubmed_id": "23107783"
},
{
"study_accession": "SDY207",
"study_title": "Cytometry by time-of-flight shows combinatorial cytokine expression and virus-specific cell niches within a continuum of CD8+ T cell phenotypes",
"actual_enrollment": 6,
"measurement_technique": "CyTOF",
"authors": "Newell EW, Sigal N, Bendall SC, Nolan GP, Davis MM",
"publication_title": "Cytometry by time-of-flight shows combinatorial cytokine expression and virus-specific cell niches within a continuum of CD8+ T cell phenotypes.",
"pubmed_id": "22265676"
},
{
"study_accession": "SDY212",
"study_title": "Apoptosis and other immune biomarkers predict influenza vaccine (TIV 2008) responsiveness SLVP015",
"actual_enrollment": 91,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Protein microarray, Transcription profiling by array",
"authors": "Furman D, Jojic V, Kidd B, Shen-Orr S, Price J, Jarrell J, Tse T, Huang H, Lund P, Maecker HT, Utz PJ, Dekker CL, Koller D, Davis MM",
"publication_title": "Apoptosis and other immune biomarkers predict influenza vaccine responsiveness.",
"pubmed_id": "23591775"
},
{
"study_accession": "SDY212",
"study_title": "Apoptosis and other immune biomarkers predict influenza vaccine (TIV 2008) responsiveness SLVP015",
"actual_enrollment": 91,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Protein microarray, Transcription profiling by array",
"authors": "Wang C, Liu Y, Xu LT, Jackson KJ, Roskin KM, Pham TD, Laserson J, Marshall EL, Seo K, Lee JY, Furman D, Koller D, Dekker CL, Davis MM, Fire AZ, Boyd SD",
"publication_title": "Effects of aging, cytomegalovirus infection, and EBV infection on human B cell repertoires.",
"pubmed_id": "24337376"
},
{
"study_accession": "SDY212",
"study_title": "Apoptosis and other immune biomarkers predict influenza vaccine (TIV 2008) responsiveness SLVP015",
"actual_enrollment": 91,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Protein microarray, Transcription profiling by array",
"authors": "Furman D, Jojic V, Sharma S, Shen-Orr SS, Angel CJ, Onengut-Gumuscu S, Kidd BA, Maecker HT, Concannon P, Dekker CL, Thomas PG, Davis MM",
"publication_title": "Cytomegalovirus infection enhances the immune response to influenza.",
"pubmed_id": "25834109"
},
{
"study_accession": "SDY212",
"study_title": "Apoptosis and other immune biomarkers predict influenza vaccine (TIV 2008) responsiveness SLVP015",
"actual_enrollment": 91,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Protein microarray, Transcription profiling by array",
"authors": "Shen-Orr SS, Furman D, Kidd BA, Hadad F, Lovelace P, Huang YW, Rosenberg-Hasson Y, Mackey S, Grisar FA, Pickman Y, Maecker HT, Chien YH, Dekker CL, Wu JC, Butte AJ, Davis MM",
"publication_title": "Defective Signaling in the JAK-STAT Pathway Tracks with Chronic Inflammation and Cardiovascular Risk in Aging Humans.",
"pubmed_id": "27746093"
},
{
"study_accession": "SDY212",
"study_title": "Apoptosis and other immune biomarkers predict influenza vaccine (TIV 2008) responsiveness SLVP015",
"actual_enrollment": 91,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Protein microarray, Transcription profiling by array",
"authors": "Alpert A, Pickman Y, Leipold M, Rosenberg-Hasson Y, Ji X, Gaujoux R, Rabani H, Starosvetsky E, Kveler K, Schaffert S, Furman D, Caspi O, Rosenschein U, Khatri P, Dekker CL, Maecker HT, Davis MM, Shen-Orr SS",
"publication_title": "A clinically meaningful metric of immune age derived from high-dimensional longitudinal monitoring.",
"pubmed_id": "30842675"
},
{
"study_accession": "SDY212",
"study_title": "Apoptosis and other immune biomarkers predict influenza vaccine (TIV 2008) responsiveness SLVP015",
"actual_enrollment": 91,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Protein microarray, Transcription profiling by array",
"authors": "Tomic A, Tomic I, Dekker CL, Maecker HT, Davis MM",
"publication_title": "The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.",
"pubmed_id": "31636302"
},
{
"study_accession": "SDY215",
"study_title": "TIV 2008 vaccination of CD95-/- mice and ELISA for detection of influenza-specific antibodies",
"actual_enrollment": 17,
"measurement_technique": "ELISA",
"authors": "Furman D, Jojic V, Kidd B, Shen-Orr S, Price J, Jarrell J, Tse T, Huang H, Lund P, Maecker HT, Utz PJ, Dekker CL, Koller D, Davis MM",
"publication_title": "Apoptosis and other immune biomarkers predict influenza vaccine responsiveness.",
"pubmed_id": "23591775"
},
{
"study_accession": "SDY232",
"study_title": "Determinants of human NK cell diversity by mass cytometry",
"actual_enrollment": 22,
"measurement_technique": "CyTOF",
"authors": "Horowitz A, Strauss-Albee DM, Leipold M, Kubo J, Nemat-Gorgani N, Dogan OC, Dekker CL, Mackey S, Maecker H, Swan GE, Davis MM, Norman PJ, Guethlein LA, Desai M, Parham P, Blish CA",
"publication_title": "Genetic and environmental determinants of human NK cell diversity revealed by mass cytometry.",
"pubmed_id": "24154599"
},
{
"study_accession": "SDY232",
"study_title": "Determinants of human NK cell diversity by mass cytometry",
"actual_enrollment": 22,
"measurement_technique": "CyTOF",
"authors": "Strauss-Albee DM, Horowitz A, Parham P, Blish CA",
"publication_title": "Coordinated regulation of NK receptor expression in the maturing human immune system.",
"pubmed_id": "25288567"
},
{
"study_accession": "SDY269",
"study_title": "Systems Biology of 2008 Influenza Vaccination in Humans (See companion studies SDY61 2007 / SDY270 2009 / SDY271 Role for CaMKIV in the Regulation of Antibody Responses to Influenza Vaccine)",
"actual_enrollment": 63,
"measurement_technique": "ELISPOT, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Q-PCR, Transcription profiling by array",
"authors": "Nakaya HI, Wrammert J, Lee EK, Racioppi L, Marie-Kunze S, Haining WN, Means AR, Kasturi SP, Khan N, Li GM, McCausland M, Kanchan V, Kokko KE, Li S, Elbein R, Mehta AK, Aderem A, Subbarao K, Ahmed R, Pulendran B",
"publication_title": "Systems biology of vaccination for seasonal influenza in humans.",
"pubmed_id": "21743478"
},
{
"study_accession": "SDY269",
"study_title": "Systems Biology of 2008 Influenza Vaccination in Humans (See companion studies SDY61 2007 / SDY270 2009 / SDY271 Role for CaMKIV in the Regulation of Antibody Responses to Influenza Vaccine)",
"actual_enrollment": 63,
"measurement_technique": "ELISPOT, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Q-PCR, Transcription profiling by array",
"authors": "Nakaya HI, Hagan T, Duraisingham SS, Lee EK, Kwissa M, Rouphael N, Frasca D, Gersten M, Mehta AK, Gaujoux R, Li GM, Gupta S, Ahmed R, Mulligan MJ, Shen-Orr S, Blomberg BB, Subramaniam S, Pulendran B",
"publication_title": "Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures.",
"pubmed_id": "26682988"
},
{
"study_accession": "SDY270",
"study_title": "Systems Biology of 2009 Influenza Vaccination in Humans (See companion studies SDY61 2007 / SDY269 2008 / SDY271 Role for CaMKIV in the Regulation of Antibody Responses to Influenza Vaccine)",
"actual_enrollment": 30,
"measurement_technique": "Hemagglutination Inhibition, Q-PCR, Transcription profiling by array",
"authors": "Nakaya HI, Wrammert J, Lee EK, Racioppi L, Marie-Kunze S, Haining WN, Means AR, Kasturi SP, Khan N, Li GM, McCausland M, Kanchan V, Kokko KE, Li S, Elbein R, Mehta AK, Aderem A, Subbarao K, Ahmed R, Pulendran B",
"publication_title": "Systems biology of vaccination for seasonal influenza in humans.",
"pubmed_id": "21743478"
},
{
"study_accession": "SDY270",
"study_title": "Systems Biology of 2009 Influenza Vaccination in Humans (See companion studies SDY61 2007 / SDY269 2008 / SDY271 Role for CaMKIV in the Regulation of Antibody Responses to Influenza Vaccine)",
"actual_enrollment": 30,
"measurement_technique": "Hemagglutination Inhibition, Q-PCR, Transcription profiling by array",
"authors": "Nakaya HI, Hagan T, Duraisingham SS, Lee EK, Kwissa M, Rouphael N, Frasca D, Gersten M, Mehta AK, Gaujoux R, Li GM, Gupta S, Ahmed R, Mulligan MJ, Shen-Orr S, Blomberg BB, Subramaniam S, Pulendran B",
"publication_title": "Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures.",
"pubmed_id": "26682988"
},
{
"study_accession": "SDY271",
"study_title": "Role for CaMKIV in the Regulation of Antibody Responses to Influenza Vaccine (See companion studies SDY61 2007 / SDY269 2008 / SDY270 2009)",
"actual_enrollment": 36,
"measurement_technique": "ELISA, Immunoblot, Q-PCR",
"authors": "Nakaya HI, Wrammert J, Lee EK, Racioppi L, Marie-Kunze S, Haining WN, Means AR, Kasturi SP, Khan N, Li GM, McCausland M, Kanchan V, Kokko KE, Li S, Elbein R, Mehta AK, Aderem A, Subbarao K, Ahmed R, Pulendran B",
"publication_title": "Systems biology of vaccination for seasonal influenza in humans.",
"pubmed_id": "21743478"
},
{
"study_accession": "SDY296",
"study_title": "Systems Biology Approach to Analysis of 2011-12 TIV Fluzone Influenza Vaccine Response in Healthy Individuals (see companion studies SDY74, SDY301)",
"actual_enrollment": 45,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Nanostring, Sequencing, Transcription profiling by array, Virus Neutralization",
"authors": "Bentebibel SE, Lopez S, Obermoser G, Schmitt N, Mueller C, Harrod C, Flano E, Mejias A, Albrecht RA, Blankenship D, Xu H, Pascual V, Banchereau J, Garcia-Sastre A, Palucka AK, Ramilo O, Ueno H",
"publication_title": "Induction of ICOS+CXCR3+CXCR5+ TH cells correlates with antibody responses to influenza vaccination.",
"pubmed_id": "23486778"
},
{
"study_accession": "SDY299",
"study_title": "Systems Biology Analysis of the response to Licensed Hepatitis B Vaccine (HEPLISAV) in Whole Blood (see companion studies SDY816 and SDY690)",
"actual_enrollment": 25,
"measurement_technique": "Nanostring, Transcription profiling by array",
"authors": "Sablan BP, Kim DJ, Barzaga NG, Chow WC, Cho M, Ahn SH, Hwang SG, Lee JH, Namini H, Heyward WL",
"publication_title": "Demonstration of safety and enhanced seroprotection against hepatitis B with investigational HBsAg-1018 ISS vaccine compared to a licensed hepatitis B vaccine.",
"pubmed_id": "22342916"
},
{
"study_accession": "SDY299",
"study_title": "Systems Biology Analysis of the response to Licensed Hepatitis B Vaccine (HEPLISAV) in Whole Blood (see companion studies SDY816 and SDY690)",
"actual_enrollment": 25,
"measurement_technique": "Nanostring, Transcription profiling by array",
"authors": "Heyward WL, Kyle M, Blumenau J, Davis M, Reisinger K, Kabongo ML, Bennett S, Janssen RS, Namini H, Martin JT",
"publication_title": "Immunogenicity and safety of an investigational hepatitis B vaccine with a Toll-like receptor 9 agonist adjuvant (HBsAg-1018) compared to a licensed hepatitis B vaccine in healthy adults 40-70 years of age.",
"pubmed_id": "23727002"
},
{
"study_accession": "SDY299",
"study_title": "Systems Biology Analysis of the response to Licensed Hepatitis B Vaccine (HEPLISAV) in Whole Blood (see companion studies SDY816 and SDY690)",
"actual_enrollment": 25,
"measurement_technique": "Nanostring, Transcription profiling by array",
"authors": "Janssen JM, Jackson S, Heyward WL, Janssen RS",
"publication_title": "Immunogenicity of an investigational hepatitis B vaccine with a toll-like receptor 9 agonist adjuvant (HBsAg-1018) compared with a licensed hepatitis B vaccine in subpopulations of healthy adults 18-70 years of age.",
"pubmed_id": "26067185"
},
{
"study_accession": "SDY299",
"study_title": "Systems Biology Analysis of the response to Licensed Hepatitis B Vaccine (HEPLISAV) in Whole Blood (see companion studies SDY816 and SDY690)",
"actual_enrollment": 25,
"measurement_technique": "Nanostring, Transcription profiling by array",
"authors": "Jackson S, Lentino J, Kopp J, Murray L, Ellison W, Rhee M, Shockey G, Akella L, Erby K, Heyward WL, Janssen RS",
"publication_title": "Immunogenicity of a two-dose investigational hepatitis B vaccine, HBsAg-1018, using a toll-like receptor 9 agonist adjuvant compared with a licensed hepatitis B vaccine in adults.",
"pubmed_id": "29289383"
},
{
"study_accession": "SDY305",
"study_title": "Plasmablast response to inactivated and live attenuated influenza vaccines (TIV3/TIV3 ID) SLVP021 2012",
"actual_enrollment": 25,
"measurement_technique": "CyTOF, ELISA, ELISPOT, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Transcription profiling by array",
"authors": "Tomic A, Tomic I, Dekker CL, Maecker HT, Davis MM",
"publication_title": "The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.",
"pubmed_id": "31636302"
},
{
"study_accession": "SDY311",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2010 (See companion studies SDY315 2012 / SDY312 2009 / SDY314 2008 / SDY112 2011)",
"actual_enrollment": 76,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL, Transcription profiling by array",
"authors": "Furman D, Chang J, Lartigue L, Bolen CR, Haddad F, Gaudilliere B, Ganio EA, Fragiadakis GK, Spitzer MH, Douchet I, Daburon S, Moreau JF, Nolan GP, Blanco P, Dechanet-Merville J, Dekker CL, Jojic V, Kuo CJ, Davis MM, Faustin B",
"publication_title": "Expression of specific inflammasome gene modules stratifies older individuals into two extreme clinical and immunological states.",
"pubmed_id": "28092664"
},
{
"study_accession": "SDY311",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2010 (See companion studies SDY315 2012 / SDY312 2009 / SDY314 2008 / SDY112 2011)",
"actual_enrollment": 76,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL, Transcription profiling by array",
"authors": "Blazkova J, Gupta S, Liu Y, Gaudilliere B, Ganio EA, Bolen CR, Saar-Dover R, Fragiadakis GK, Angst MS, Hasni S, Aghaeepour N, Stevenson D, Baldwin N, Anguiano E, Chaussabel D, Altman MC, Kaplan MJ, Davis MM, Furman D",
"publication_title": "Multicenter Systems Analysis of Human Blood Reveals Immature Neutrophils in Males and During Pregnancy.",
"pubmed_id": "28179497"
},
{
"study_accession": "SDY311",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2010 (See companion studies SDY315 2012 / SDY312 2009 / SDY314 2008 / SDY112 2011)",
"actual_enrollment": 76,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL, Transcription profiling by array",
"authors": "Alpert A, Pickman Y, Leipold M, Rosenberg-Hasson Y, Ji X, Gaujoux R, Rabani H, Starosvetsky E, Kveler K, Schaffert S, Furman D, Caspi O, Rosenschein U, Khatri P, Dekker CL, Maecker HT, Davis MM, Shen-Orr SS",
"publication_title": "A clinically meaningful metric of immune age derived from high-dimensional longitudinal monitoring.",
"pubmed_id": "30842675"
},
{
"study_accession": "SDY311",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2010 (See companion studies SDY315 2012 / SDY312 2009 / SDY314 2008 / SDY112 2011)",
"actual_enrollment": 76,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL, Transcription profiling by array",
"authors": "Tomic A, Tomic I, Dekker CL, Maecker HT, Davis MM",
"publication_title": "The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.",
"pubmed_id": "31636302"
},
{
"study_accession": "SDY312",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2009 (See companion studies SDY315 2012 / SDY314 2008 / SDY311 2010 / SDY112 2011)",
"actual_enrollment": 84,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL, Transcription profiling by array",
"authors": "Shen-Orr SS, Furman D, Kidd BA, Hadad F, Lovelace P, Huang YW, Rosenberg-Hasson Y, Mackey S, Grisar FA, Pickman Y, Maecker HT, Chien YH, Dekker CL, Wu JC, Butte AJ, Davis MM",
"publication_title": "Defective Signaling in the JAK-STAT Pathway Tracks with Chronic Inflammation and Cardiovascular Risk in Aging Humans.",
"pubmed_id": "27746093"
},
{
"study_accession": "SDY312",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2009 (See companion studies SDY315 2012 / SDY314 2008 / SDY311 2010 / SDY112 2011)",
"actual_enrollment": 84,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL, Transcription profiling by array",
"authors": "Furman D, Chang J, Lartigue L, Bolen CR, Haddad F, Gaudilliere B, Ganio EA, Fragiadakis GK, Spitzer MH, Douchet I, Daburon S, Moreau JF, Nolan GP, Blanco P, Dechanet-Merville J, Dekker CL, Jojic V, Kuo CJ, Davis MM, Faustin B",
"publication_title": "Expression of specific inflammasome gene modules stratifies older individuals into two extreme clinical and immunological states.",
"pubmed_id": "28092664"
},
{
"study_accession": "SDY312",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2009 (See companion studies SDY315 2012 / SDY314 2008 / SDY311 2010 / SDY112 2011)",
"actual_enrollment": 84,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL, Transcription profiling by array",
"authors": "Blazkova J, Gupta S, Liu Y, Gaudilliere B, Ganio EA, Bolen CR, Saar-Dover R, Fragiadakis GK, Angst MS, Hasni S, Aghaeepour N, Stevenson D, Baldwin N, Anguiano E, Chaussabel D, Altman MC, Kaplan MJ, Davis MM, Furman D",
"publication_title": "Multicenter Systems Analysis of Human Blood Reveals Immature Neutrophils in Males and During Pregnancy.",
"pubmed_id": "28179497"
},
{
"study_accession": "SDY312",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2009 (See companion studies SDY315 2012 / SDY314 2008 / SDY311 2010 / SDY112 2011)",
"actual_enrollment": 84,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL, Transcription profiling by array",
"authors": "Alpert A, Pickman Y, Leipold M, Rosenberg-Hasson Y, Ji X, Gaujoux R, Rabani H, Starosvetsky E, Kveler K, Schaffert S, Furman D, Caspi O, Rosenschein U, Khatri P, Dekker CL, Maecker HT, Davis MM, Shen-Orr SS",
"publication_title": "A clinically meaningful metric of immune age derived from high-dimensional longitudinal monitoring.",
"pubmed_id": "30842675"
},
{
"study_accession": "SDY312",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2009 (See companion studies SDY315 2012 / SDY314 2008 / SDY311 2010 / SDY112 2011)",
"actual_enrollment": 84,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL, Transcription profiling by array",
"authors": "Tomic A, Tomic I, Dekker CL, Maecker HT, Davis MM",
"publication_title": "The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.",
"pubmed_id": "31636302"
},
{
"study_accession": "SDY314",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2008 (See companion studies SDY315 2012 / SDY312 2009 / SDY311 2010 / SDY112 2011)",
"actual_enrollment": 92,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, HLA Typing, Transcription profiling by array, Virus Neutralization",
"authors": "Furman D, Chang J, Lartigue L, Bolen CR, Haddad F, Gaudilliere B, Ganio EA, Fragiadakis GK, Spitzer MH, Douchet I, Daburon S, Moreau JF, Nolan GP, Blanco P, Dechanet-Merville J, Dekker CL, Jojic V, Kuo CJ, Davis MM, Faustin B",
"publication_title": "Expression of specific inflammasome gene modules stratifies older individuals into two extreme clinical and immunological states.",
"pubmed_id": "28092664"
},
{
"study_accession": "SDY314",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2008 (See companion studies SDY315 2012 / SDY312 2009 / SDY311 2010 / SDY112 2011)",
"actual_enrollment": 92,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, HLA Typing, Transcription profiling by array, Virus Neutralization",
"authors": "Blazkova J, Gupta S, Liu Y, Gaudilliere B, Ganio EA, Bolen CR, Saar-Dover R, Fragiadakis GK, Angst MS, Hasni S, Aghaeepour N, Stevenson D, Baldwin N, Anguiano E, Chaussabel D, Altman MC, Kaplan MJ, Davis MM, Furman D",
"publication_title": "Multicenter Systems Analysis of Human Blood Reveals Immature Neutrophils in Males and During Pregnancy.",
"pubmed_id": "28179497"
},
{
"study_accession": "SDY315",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2012 (See companion studies SDY311 2010 / SDY312 2009 / SDY314 2008 / SDY112 2011)",
"actual_enrollment": 74,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Transcription profiling by array",
"authors": "Furman D, Chang J, Lartigue L, Bolen CR, Haddad F, Gaudilliere B, Ganio EA, Fragiadakis GK, Spitzer MH, Douchet I, Daburon S, Moreau JF, Nolan GP, Blanco P, Dechanet-Merville J, Dekker CL, Jojic V, Kuo CJ, Davis MM, Faustin B",
"publication_title": "Expression of specific inflammasome gene modules stratifies older individuals into two extreme clinical and immunological states.",
"pubmed_id": "28092664"
},
{
"study_accession": "SDY315",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2012 (See companion studies SDY311 2010 / SDY312 2009 / SDY314 2008 / SDY112 2011)",
"actual_enrollment": 74,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Transcription profiling by array",
"authors": "Blazkova J, Gupta S, Liu Y, Gaudilliere B, Ganio EA, Bolen CR, Saar-Dover R, Fragiadakis GK, Angst MS, Hasni S, Aghaeepour N, Stevenson D, Baldwin N, Anguiano E, Chaussabel D, Altman MC, Kaplan MJ, Davis MM, Furman D",
"publication_title": "Multicenter Systems Analysis of Human Blood Reveals Immature Neutrophils in Males and During Pregnancy.",
"pubmed_id": "28179497"
},
{
"study_accession": "SDY315",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2012 (See companion studies SDY311 2010 / SDY312 2009 / SDY314 2008 / SDY112 2011)",
"actual_enrollment": 74,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Transcription profiling by array",
"authors": "Alpert A, Pickman Y, Leipold M, Rosenberg-Hasson Y, Ji X, Gaujoux R, Rabani H, Starosvetsky E, Kveler K, Schaffert S, Furman D, Caspi O, Rosenschein U, Khatri P, Dekker CL, Maecker HT, Davis MM, Shen-Orr SS",
"publication_title": "A clinically meaningful metric of immune age derived from high-dimensional longitudinal monitoring.",
"pubmed_id": "30842675"
},
{
"study_accession": "SDY315",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination (TIV) SLVP015 2012 (See companion studies SDY311 2010 / SDY312 2009 / SDY314 2008 / SDY112 2011)",
"actual_enrollment": 74,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Transcription profiling by array",
"authors": "Tomic A, Tomic I, Dekker CL, Maecker HT, Davis MM",
"publication_title": "The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.",
"pubmed_id": "31636302"
},
{
"study_accession": "SDY387",
"study_title": "Systems Biology Approach to Study Influenza Vaccine 2010-11 in Healthy Children (see companion studies SDY144, SDY368, SDY387, SDY522)",
"actual_enrollment": 22,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Transcription profiling by array, Virus Neutralization",
"authors": "Bentebibel SE, Lopez S, Obermoser G, Schmitt N, Mueller C, Harrod C, Flano E, Mejias A, Albrecht RA, Blankenship D, Xu H, Pascual V, Banchereau J, Garcia-Sastre A, Palucka AK, Ramilo O, Ueno H",
"publication_title": "Induction of ICOS+CXCR3+CXCR5+ TH cells correlates with antibody responses to influenza vaccination.",
"pubmed_id": "23486778"
},
{
"study_accession": "SDY400",
"study_title": "Immunologic and genomic signatures of influenza vaccine response - 2012 (see companion studies SDY63, SDY404, SDY520)",
"actual_enrollment": 98,
"measurement_technique": "Hemagglutination Inhibition, Mass Spectrometry, Transcription profiling by array",
"authors": "Avey S, Mohanty S, Wilson J, Zapata H, Joshi SR, Siconolfi B, Tsang S, Shaw AC, Kleinstein SH",
"publication_title": "Multiple network-constrained regressions expand insights into influenza vaccination responses.",
"pubmed_id": "28881994"
},
{
"study_accession": "SDY400",
"study_title": "Immunologic and genomic signatures of influenza vaccine response - 2012 (see companion studies SDY63, SDY404, SDY520)",
"actual_enrollment": 98,
"measurement_technique": "Hemagglutination Inhibition, Mass Spectrometry, Transcription profiling by array",
"authors": "Meng H, Yaari G, Bolen CR, Avey S, Kleinstein SH",
"publication_title": "Gene set meta-analysis with Quantitative Set Analysis for Gene Expression (QuSAGE).",
"pubmed_id": "30939133"
},
{
"study_accession": "SDY404",
"study_title": "Immunologic and genomic signatures of influenza vaccine response - 2011 (see companion studies SDY63, SDY400, SDY520)",
"actual_enrollment": 72,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Mass Spectrometry, Transcription profiling by array",
"authors": "Mohanty S, Joshi SR, Ueda I, Wilson J, Blevins TP, Siconolfi B, Meng H, Devine L, Raddassi K, Tsang S, Belshe RB, Hafler DA, Kaech SM, Kleinstein SH, Trentalange M, Allore HG, Shaw AC",
"publication_title": "Prolonged proinflammatory cytokine production in monocytes modulated by interleukin 10 after influenza vaccination in older adults.",
"pubmed_id": "25367297"
},
{
"study_accession": "SDY404",
"study_title": "Immunologic and genomic signatures of influenza vaccine response - 2011 (see companion studies SDY63, SDY400, SDY520)",
"actual_enrollment": 72,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Mass Spectrometry, Transcription profiling by array",
"authors": "Avey S, Mohanty S, Wilson J, Zapata H, Joshi SR, Siconolfi B, Tsang S, Shaw AC, Kleinstein SH",
"publication_title": "Multiple network-constrained regressions expand insights into influenza vaccination responses.",
"pubmed_id": "28881994"
},
{
"study_accession": "SDY404",
"study_title": "Immunologic and genomic signatures of influenza vaccine response - 2011 (see companion studies SDY63, SDY400, SDY520)",
"actual_enrollment": 72,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Mass Spectrometry, Transcription profiling by array",
"authors": "Meng H, Yaari G, Bolen CR, Avey S, Kleinstein SH",
"publication_title": "Gene set meta-analysis with Quantitative Set Analysis for Gene Expression (QuSAGE).",
"pubmed_id": "30939133"
},
{
"study_accession": "SDY422",
"study_title": "DFCI HLA typing",
"actual_enrollment": 72,
"measurement_technique": "HLA Typing",
"authors": "Zhang GL, Keskin DB, Lin HN, Lin HH, DeLuca DS, Leppanen S, Milford EL, Reinherz EL, Brusic V",
"publication_title": "Human leukocyte antigen typing using a knowledge base coupled with a high-throughput oligonucleotide probe array analysis.",
"pubmed_id": "25505899"
},
{
"study_accession": "SDY460",
"study_title": "B and T Cell Determinants of Influenza Vaccine Responses in the Elderly 2008 (see companion study SDY773)",
"actual_enrollment": 27,
"measurement_technique": "Sequencing",
"authors": "Wang C, Liu Y, Xu LT, Jackson KJ, Roskin KM, Pham TD, Laserson J, Marshall EL, Seo K, Lee JY, Furman D, Koller D, Dekker CL, Davis MM, Fire AZ, Boyd SD",
"publication_title": "Effects of aging, cytomegalovirus infection, and EBV infection on human B cell repertoires.",
"pubmed_id": "24337376"
},
{
"study_accession": "SDY472",
"study_title": "Plasmablast response to inactivated and live attenuated influenza vaccines (TIV3/TIV3 ID) in SLVP021 2013",
"actual_enrollment": 25,
"measurement_technique": "CyTOF, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL",
"authors": "Tomic A, Tomic I, Dekker CL, Maecker HT, Davis MM",
"publication_title": "The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.",
"pubmed_id": "31636302"
},
{
"study_accession": "SDY478",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination SLVP015 2013",
"actual_enrollment": 71,
"measurement_technique": "CyTOF, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL",
"authors": "Alpert A, Pickman Y, Leipold M, Rosenberg-Hasson Y, Ji X, Gaujoux R, Rabani H, Starosvetsky E, Kveler K, Schaffert S, Furman D, Caspi O, Rosenschein U, Khatri P, Dekker CL, Maecker HT, Davis MM, Shen-Orr SS",
"publication_title": "A clinically meaningful metric of immune age derived from high-dimensional longitudinal monitoring.",
"pubmed_id": "30842675"
},
{
"study_accession": "SDY478",
"study_title": "T cell responses to H1N1v and a longitudinal study of seasonal influenza vaccination SLVP015 2013",
"actual_enrollment": 71,
"measurement_technique": "CyTOF, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL",
"authors": "Tomic A, Tomic I, Dekker CL, Maecker HT, Davis MM",
"publication_title": "The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.",
"pubmed_id": "31636302"
},
{
"study_accession": "SDY514",
"study_title": "Monozygotic and Dizygotic Twin Pair T-Cell Responses to Influenza Vaccination SLVP018 2009",
"actual_enrollment": 74,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL",
"authors": "Brodin P, Jojic V, Gao T, Bhattacharya S, Angel CJ, Furman D, Shen-Orr S, Dekker CL, Swan GE, Butte AJ, Maecker HT, Davis MM",
"publication_title": "Variation in the human immune system is largely driven by non-heritable influences.",
"pubmed_id": "25594173"
},
{
"study_accession": "SDY514",
"study_title": "Monozygotic and Dizygotic Twin Pair T-Cell Responses to Influenza Vaccination SLVP018 2009",
"actual_enrollment": 74,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL",
"authors": "Tomic A, Tomic I, Dekker CL, Maecker HT, Davis MM",
"publication_title": "The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.",
"pubmed_id": "31636302"
},
{
"study_accession": "SDY515",
"study_title": "Monozygotic and Dizygotic Twin Pair T-Cell Responses to Influenza Vaccination SLVP018 2010",
"actual_enrollment": 84,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL",
"authors": "Brodin P, Jojic V, Gao T, Bhattacharya S, Angel CJ, Furman D, Shen-Orr S, Dekker CL, Swan GE, Butte AJ, Maecker HT, Davis MM",
"publication_title": "Variation in the human immune system is largely driven by non-heritable influences.",
"pubmed_id": "25594173"
},
{
"study_accession": "SDY515",
"study_title": "Monozygotic and Dizygotic Twin Pair T-Cell Responses to Influenza Vaccination SLVP018 2010",
"actual_enrollment": 84,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP, Meso Scale Discovery ECL",
"authors": "Tomic A, Tomic I, Dekker CL, Maecker HT, Davis MM",
"publication_title": "The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.",
"pubmed_id": "31636302"
},
{
"study_accession": "SDY519",
"study_title": "Monozygotic and Dizygotic Twin Pair T-Cell Responses to Influenza Vaccination SLVP018 2011",
"actual_enrollment": 63,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP",
"authors": "Brodin P, Jojic V, Gao T, Bhattacharya S, Angel CJ, Furman D, Shen-Orr S, Dekker CL, Swan GE, Butte AJ, Maecker HT, Davis MM",
"publication_title": "Variation in the human immune system is largely driven by non-heritable influences.",
"pubmed_id": "25594173"
},
{
"study_accession": "SDY519",
"study_title": "Monozygotic and Dizygotic Twin Pair T-Cell Responses to Influenza Vaccination SLVP018 2011",
"actual_enrollment": 63,
"measurement_technique": "CyTOF, Flow Cytometry, Hemagglutination Inhibition, Luminex xMAP",
"authors": "Tomic A, Tomic I, Dekker CL, Maecker HT, Davis MM",
"publication_title": "The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.",
"pubmed_id": "31636302"
},
{
"study_accession": "SDY520",
"study_title": "Immunologic and genomic signatures of influenza vaccine response - 2013 (see companion studies SDY63, SDY404, SDY400)",
"actual_enrollment": 61,
"measurement_technique": "Hemagglutination Inhibition, Transcription profiling by array",
"authors": "Meng H, Yaari G, Bolen CR, Avey S, Kleinstein SH",
"publication_title": "Gene set meta-analysis with Quantitative Set Analysis for Gene Expression (QuSAGE).",
"pubmed_id": "30939133"
},
{
"study_accession": "SDY522",
"study_title": "Differences in Antibody Responses Between Trivalent Inactivated Influenza Vaccine and Live Attenuated Influenza Vaccine (2011-12) Correlate With the Kinetics and Magnitude of Interferon Signaling in Children (see companion study SDY144)",
"actual_enrollment": 20,
"measurement_technique": "Flow Cytometry, Hemagglutination Inhibition, Transcription profiling by array, Virus Neutralization",
"authors": "Cao RG, Suarez NM, Obermoser G, Lopez SM, Flano E, Mertz SE, Albrecht RA, Garcia-Sastre A, Mejias A, Xu H, Qin H, Blankenship D, Palucka K, Pascual V, Ramilo O",
"publication_title": "Differences in antibody responses between trivalent inactivated influenza vaccine and live attenuated influenza vaccine correlate with the kinetics and magnitude of interferon signaling in children.",
"pubmed_id": "24495909"
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{
"study_accession": "SDY597",
"study_title": "DC transcriptomics in response to vaccines",
"actual_enrollment": 20,
"measurement_technique": "Transcription profiling by array",
"authors": "Banchereau R, Baldwin N, Cepika AM, Athale S, Xue Y, Yu CI, Metang P, Cheruku A, Berthier I, Gayet I, Wang Y, Ohouo M, Snipes L, Xu H, Obermoser G, Blankenship D, Oh S, Ramilo O, Chaussabel D, Banchereau J, Palucka K, Pascual V",
"publication_title": "Transcriptional specialization of human dendritic cell subsets in response to microbial vaccines.",
"pubmed_id": "25335753"
},
{
"study_accession": "SDY675",
"study_title": "Heritable influence on the B and T cell receptor repertoire",
"actual_enrollment": 10,
"measurement_technique": "Sequencing",
"authors": "Rubelt F, Bolen CR, McGuire HM, Vander Heiden JA, Gadala-Maria D, Levin M, Euskirchen GM, Mamedov MR, Swan GE, Dekker CL, Cowell LG, Kleinstein SH, Davis MM",
"publication_title": "Individual heritable differences result in unique cell lymphocyte receptor repertoires of naive and antigen-experienced cells.",
"pubmed_id": "27005435"
},
{
"study_accession": "SDY680",
"study_title": "Human Elispot Assay with peptide.",
"actual_enrollment": 10,
"measurement_technique": "ELISPOT",
"authors": "Keskin DB, Reinhold BB, Zhang GL, Ivanov AR, Karger BL, Reinherz EL",
"publication_title": "Physical detection of influenza A epitopes identifies a stealth subset on human lung epithelium evading natural CD8 immunity.",
"pubmed_id": "25646416"
},
{
"study_accession": "SDY690",
"study_title": "Systems Biology Study to Investigate Immune Correlates to Hepatitis B Vaccine Engerix-B comparing cellular responses and gene expression patterns between PBMCs (cell sorts) and whole blood samples (see companion studies SDY816 and SDY299)",
"actual_enrollment": 12,
"measurement_technique": "Transcription profiling by array",
"authors": "Sablan BP, Kim DJ, Barzaga NG, Chow WC, Cho M, Ahn SH, Hwang SG, Lee JH, Namini H, Heyward WL",
"publication_title": "Demonstration of safety and enhanced seroprotection against hepatitis B with investigational HBsAg-1018 ISS vaccine compared to a licensed hepatitis B vaccine.",
"pubmed_id": "22342916"
},
{
"study_accession": "SDY690",
"study_title": "Systems Biology Study to Investigate Immune Correlates to Hepatitis B Vaccine Engerix-B comparing cellular responses and gene expression patterns between PBMCs (cell sorts) and whole blood samples (see companion studies SDY816 and SDY299)",
"actual_enrollment": 12,
"measurement_technique": "Transcription profiling by array",
"authors": "Heyward WL, Kyle M, Blumenau J, Davis M, Reisinger K, Kabongo ML, Bennett S, Janssen RS, Namini H, Martin JT",
"publication_title": "Immunogenicity and safety of an investigational hepatitis B vaccine with a Toll-like receptor 9 agonist adjuvant (HBsAg-1018) compared to a licensed hepatitis B vaccine in healthy adults 40-70 years of age.",
"pubmed_id": "23727002"
},
{
"study_accession": "SDY690",
"study_title": "Systems Biology Study to Investigate Immune Correlates to Hepatitis B Vaccine Engerix-B comparing cellular responses and gene expression patterns between PBMCs (cell sorts) and whole blood samples (see companion studies SDY816 and SDY299)",
"actual_enrollment": 12,
"measurement_technique": "Transcription profiling by array",
"authors": "Janssen JM, Jackson S, Heyward WL, Janssen RS",
"publication_title": "Immunogenicity of an investigational hepatitis B vaccine with a toll-like receptor 9 agonist adjuvant (HBsAg-1018) compared with a licensed hepatitis B vaccine in subpopulations of healthy adults 18-70 years of age.",
"pubmed_id": "26067185"
},
{
"study_accession": "SDY690",
"study_title": "Systems Biology Study to Investigate Immune Correlates to Hepatitis B Vaccine Engerix-B comparing cellular responses and gene expression patterns between PBMCs (cell sorts) and whole blood samples (see companion studies SDY816 and SDY299)",
"actual_enrollment": 12,
"measurement_technique": "Transcription profiling by array",
"authors": "Jackson S, Lentino J, Kopp J, Murray L, Ellison W, Rhee M, Shockey G, Akella L, Erby K, Heyward WL, Janssen RS",
"publication_title": "Immunogenicity of a two-dose investigational hepatitis B vaccine, HBsAg-1018, using a toll-like receptor 9 agonist adjuvant compared with a licensed hepatitis B vaccine in adults.",
"pubmed_id": "29289383"
},
{
"study_accession": "SDY751",
"study_title": "MS3 peptide detection",
"actual_enrollment": 1,
"measurement_technique": "Mass Spectrometry",
"authors": "Keskin DB, Reinhold BB, Zhang GL, Ivanov AR, Karger BL, Reinherz EL",
"publication_title": "Physical detection of influenza A epitopes identifies a stealth subset on human lung epithelium evading natural CD8 immunity.",
"pubmed_id": "25646416"
},
{
"study_accession": "SDY773",
"study_title": "B and T Cell Determinants of Influenza Vaccine Responses in the Elderly SLVP015 2009 (see companion study SDY460)",
"actual_enrollment": 27,
"measurement_technique": "Sequencing",
"authors": "Wang C, Liu Y, Xu LT, Jackson KJ, Roskin KM, Pham TD, Laserson J, Marshall EL, Seo K, Lee JY, Furman D, Koller D, Dekker CL, Davis MM, Fire AZ, Boyd SD",
"publication_title": "Effects of aging, cytomegalovirus infection, and EBV infection on human B cell repertoires.",
"pubmed_id": "24337376"
},
{
"study_accession": "SDY787",
"study_title": "T cell immune signature of whole cell vs acellular pertussis vaccination in healthy individuals",
"actual_enrollment": 144,
"measurement_technique": "ELISA, ELISPOT, HLA Typing, Luminex xMAP, RNA sequencing",
"authors": "Bancroft T, Dillon MB, da Silva Antunes R, Paul S, Peters B, Crotty S, Lindestam Arlehamn CS, Sette A",
"publication_title": "Th1 versus Th2 T cell polarization by whole-cell and acellular childhood pertussis vaccines persists upon re-immunization in adolescence and adulthood.",
"pubmed_id": "27212461"
},
{
"study_accession": "SDY787",
"study_title": "T cell immune signature of whole cell vs acellular pertussis vaccination in healthy individuals",
"actual_enrollment": 144,
"measurement_technique": "ELISA, ELISPOT, HLA Typing, Luminex xMAP, RNA sequencing",
"authors": "da Silva Antunes R, Babor M, Carpenter C, Khalil N, Cortese M, Mentzer AJ, Seumois G, Petro CD, Purcell LA, Vijayanand P, Crotty S, Pulendran B, Peters B, Sette A",
"publication_title": "Th1/Th17 polarization persists following whole-cell pertussis vaccination despite repeated acellular boosters.",
"pubmed_id": "29920186"
},
{
"study_accession": "SDY816",
"study_title": "Systems Biology Analysis of the response to Licensed Hepatitis B Vaccine (HEPLISAV) in specific cell subsets (see companion studies SDY299 and SDY690)",
"actual_enrollment": 10,
"measurement_technique": "Transcription profiling by array",
"authors": "Sablan BP, Kim DJ, Barzaga NG, Chow WC, Cho M, Ahn SH, Hwang SG, Lee JH, Namini H, Heyward WL",
"publication_title": "Demonstration of safety and enhanced seroprotection against hepatitis B with investigational HBsAg-1018 ISS vaccine compared to a licensed hepatitis B vaccine.",
"pubmed_id": "22342916"
},
{
"study_accession": "SDY816",
"study_title": "Systems Biology Analysis of the response to Licensed Hepatitis B Vaccine (HEPLISAV) in specific cell subsets (see companion studies SDY299 and SDY690)",
"actual_enrollment": 10,
"measurement_technique": "Transcription profiling by array",
"authors": "Heyward WL, Kyle M, Blumenau J, Davis M, Reisinger K, Kabongo ML, Bennett S, Janssen RS, Namini H, Martin JT",
"publication_title": "Immunogenicity and safety of an investigational hepatitis B vaccine with a Toll-like receptor 9 agonist adjuvant (HBsAg-1018) compared to a licensed hepatitis B vaccine in healthy adults 40-70 years of age.",
"pubmed_id": "23727002"
},
{
"study_accession": "SDY816",
"study_title": "Systems Biology Analysis of the response to Licensed Hepatitis B Vaccine (HEPLISAV) in specific cell subsets (see companion studies SDY299 and SDY690)",
"actual_enrollment": 10,
"measurement_technique": "Transcription profiling by array",
"authors": "Janssen JM, Jackson S, Heyward WL, Janssen RS",
"publication_title": "Immunogenicity of an investigational hepatitis B vaccine with a toll-like receptor 9 agonist adjuvant (HBsAg-1018) compared with a licensed hepatitis B vaccine in subpopulations of healthy adults 18-70 years of age.",
"pubmed_id": "26067185"
},
{
"study_accession": "SDY816",
"study_title": "Systems Biology Analysis of the response to Licensed Hepatitis B Vaccine (HEPLISAV) in specific cell subsets (see companion studies SDY299 and SDY690)",
"actual_enrollment": 10,
"measurement_technique": "Transcription profiling by array",
"authors": "Jackson S, Lentino J, Kopp J, Murray L, Ellison W, Rhee M, Shockey G, Akella L, Erby K, Heyward WL, Janssen RS",
"publication_title": "Immunogenicity of a two-dose investigational hepatitis B vaccine, HBsAg-1018, using a toll-like receptor 9 agonist adjuvant compared with a licensed hepatitis B vaccine in adults.",
"pubmed_id": "29289383"
},
{
"study_accession": "SDY820",
"study_title": "Human Immune Signature of Mycobacterium Tuberculosis infection. (See SDY1324 for sorted cell gene expression data)",
"actual_enrollment": 63,
"measurement_technique": "Flow Cytometry, HLA Typing, RNA sequencing",
"authors": "Burel JG, Qian Y, Lindestam Arlehamn C, Weiskopf D, Zapardiel-Gonzalo J, Taplitz R, Gilman RH, Saito M, de Silva AD, Vijayanand P, Scheuermann RH, Sette A, Peters B",
"publication_title": "An Integrated Workflow To Assess Technical and Biological Variability of Cell Population Frequencies in Human Peripheral Blood by Flow Cytometry.",
"pubmed_id": "28069807"
},
{
"study_accession": "SDY820",
"study_title": "Human Immune Signature of Mycobacterium Tuberculosis infection. (See SDY1324 for sorted cell gene expression data)",
"actual_enrollment": 63,
"measurement_technique": "Flow Cytometry, HLA Typing, RNA sequencing",
"authors": "Burel JG, Lindestam Arlehamn CS, Khan N, Seumois G, Greenbaum JA, Taplitz R, Gilman RH, Saito M, Vijayanand P, Sette A, Peters B",
"publication_title": "Transcriptomic Analysis of CD4+ T Cells Reveals Novel Immune Signatures of Latent Tuberculosis.",
"pubmed_id": "29602771"
},
{
"study_accession": "SDY887",
"study_title": "Defective signaling in aging, influenza vaccination 2007 SLVP015",
"actual_enrollment": 29,
"measurement_technique": "Flow Cytometry, Luminex xMAP, Neutralizing Antibody Titer Assay",
"authors": "Shen-Orr SS, Furman D, Kidd BA, Hadad F, Lovelace P, Huang YW, Rosenberg-Hasson Y, Mackey S, Grisar FA, Pickman Y, Maecker HT, Chien YH, Dekker CL, Wu JC, Butte AJ, Davis MM",
"publication_title": "Defective Signaling in the JAK-STAT Pathway Tracks with Chronic Inflammation and Cardiovascular Risk in Aging Humans.",
"pubmed_id": "27746093"
},
{
"study_accession": "SDY887",
"study_title": "Defective signaling in aging, influenza vaccination 2007 SLVP015",
"actual_enrollment": 29,
"measurement_technique": "Flow Cytometry, Luminex xMAP, Neutralizing Antibody Titer Assay",
"authors": "Tomic A, Tomic I, Dekker CL, Maecker HT, Davis MM",
"publication_title": "The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.",
"pubmed_id": "31636302"
},
{
"study_accession": "SDY888",
"study_title": "Human Immune Signature of Dengue virus infection- Gene Expression of CD4 subsets",
"actual_enrollment": 122,
"measurement_technique": "CyTOF, HLA Typing, RNA sequencing",
"authors": "Tian Y, Babor M, Lane J, Schulten V, Patil VS, Seumois G, Rosales SL, Fu Z, Picarda G, Burel J, Zapardiel-Gonzalo J, Tennekoon RN, De Silva AD, Premawansa S, Premawansa G, Wijewickrama A, Greenbaum JA, Vijayanand P, Weiskopf D, Sette A, Peters B",
"publication_title": "Unique phenotypes and clonal expansions of human CD4 effector memory T cells re-expressing CD45RA.",
"pubmed_id": "29133794"
},
{
"study_accession": "SDY888",
"study_title": "Human Immune Signature of Dengue virus infection- Gene Expression of CD4 subsets",
"actual_enrollment": 122,
"measurement_technique": "CyTOF, HLA Typing, RNA sequencing",
"authors": "Tian Y, Babor M, Lane J, Seumois G, Liang S, Goonawardhana NDS, De Silva AD, Phillips EJ, Mallal SA, da Silva Antunes R, Grifoni A, Vijayanand P, Weiskopf D, Peters B, Sette A",
"publication_title": "Dengue-specific CD8+ T cell subsets display specialized transcriptomic and TCR profiles.",
"pubmed_id": "30882366"
},
{
"study_accession": "SDY903",
"study_title": "Human Immune Signature of Zika virus infection",
"actual_enrollment": 29,
"measurement_technique": "Flow Cytometry, HLA Typing, RNA sequencing",
"authors": "Grifoni A, Costa-Ramos P, Pham J, Tian Y, Rosales SL, Seumois G, Sidney J, de Silva AD, Premkumar L, Collins MH, Stone M, Norris PJ, Romero CME, Durbin A, Ricciardi MJ, Ledgerwood JE, de Silva AM, Busch M, Peters B, Vijayanand P, Harris E, Falconar AK, Kallas E, Weiskopf D, Sette A",
"publication_title": "Cutting Edge: Transcriptional Profiling Reveals Multifunctional and Cytotoxic Antiviral Responses of Zika Virus-Specific CD8+ T Cells.",
"pubmed_id": "30413672"
},
{
"study_accession": "SDY984",
"study_title": "Zoster vaccine in young and elderly",
"actual_enrollment": 77,
"measurement_technique": "ELISA, ELISPOT, Flow Cytometry, Luminex xMAP, Mass Spectrometry, Other, Q-PCR, Transcription profiling by array",
"authors": "Li S, Sullivan NL, Rouphael N, Yu T, Banton S, Maddur MS, McCausland M, Chiu C, Canniff J, Dubey S, Liu K, Tran V, Hagan T, Duraisingham S, Wieland A, Mehta AK, Whitaker JA, Subramaniam S, Jones DP, Sette A, Vora K, Weinberg A, Mulligan MJ, Nakaya HI, Levin M, Ahmed R, Pulendran B",
"publication_title": "Metabolic Phenotypes of Response to Vaccination in Humans.",
"pubmed_id": "28502771"
},
{
"study_accession": "SDY1086",
"study_title": "Responses to Inactivated Influenza Vaccine (IIV) in adults with or without antibiotics",
"actual_enrollment": 34,
"measurement_technique": "Cell Culture, ELISA, ELISPOT, Flow Cytometry, Mass Spectrometry, Neutralizing Antibody Titer Assay, RNA sequencing, Sequencing, Surface Plasmon Resonance, Transcription profiling by array",
"authors": "Hagan T, Cortese M, Rouphael N, Boudreau C, Linde C, Maddur MS, Das J, Wang H, Guthmiller J, Zheng NY, Huang M, Uphadhyay AA, Gardinassi L, Petitdemange C, McCullough MP, Johnson SJ, Gill K, Cervasi B, Zou J, Bretin A, Hahn M, Gewirtz AT, Bosinger SE, Wilson PC, Li S, Alter G, Khurana S, Golding H, Pulendran B",
"publication_title": "Antibiotics-Driven Gut Microbiome Perturbation Alters Immunity to Vaccines in Humans.",
"pubmed_id": "31491384"
},
{
"study_accession": "SDY1092",
"study_title": "Transcriptional responses induced by controlled human malaria infection (CHMI)",
"actual_enrollment": 10,
"measurement_technique": "RNA sequencing",
"authors": "Shekalaghe S, Rutaihwa M, Billingsley PF, Chemba M, Daubenberger CA, James ER, Mpina M, Ali Juma O, Schindler T, Huber E, Gunasekera A, Manoj A, Simon B, Saverino E, Church LWP, Hermsen CC, Sauerwein RW, Plowe C, Venkatesan M, Sasi P, Lweno O, Mutani P, Hamad A, Mohammed A, Urassa A, Mzee T, Padilla D, Ruben A, Sim BKL, Tanner M, Abdulla S, Hoffman SL",
"publication_title": "Controlled human malaria infection of Tanzanians by intradermal injection of aseptic, purified, cryopreserved Plasmodium falciparum sporozoites.",
"pubmed_id": "25070995"
},
{
"study_accession": "SDY1100",
"study_title": "Project 3 - Optimization experiments DCs DV2 and DV4 - CyTOF",
"actual_enrollment": 7,
"measurement_technique": "CyTOF",
"authors": "Hamlin RE, Rahman A, Pak TR, Maringer K, Mena I, Bernal-Rubio D, Potla U, Maestre AM, Fredericks AC, Amir ED, Kasarskis A, Ramos I, Merad M, Fernandez-Sesma A",
"publication_title": "High-dimensional CyTOF analysis of dengue virus-infected human DCs reveals distinct viral signatures.",
"pubmed_id": "28679950"
},
{
"study_accession": "SDY1108",
"study_title": "Systemic Immunity for Cancer Immunotherapy",
"actual_enrollment": 13,
"measurement_technique": "CyTOF",
"authors": "Spitzer MH, Carmi Y, Reticker-Flynn NE, Kwek SS, Madhireddy D, Martins MM, Gherardini PF, Prestwood TR, Chabon J, Bendall SC, Fong L, Nolan GP, Engleman EG",
"publication_title": "Systemic Immunity Is Required for Effective Cancer Immunotherapy.",
"pubmed_id": "28111070"
},
{
"study_accession": "SDY1119",
"study_title": "Systems Biology of 2011 trivalent Influenza vaccine (TIV) in young and elderly individuals, healthy or with T2D (see companion study SDY61 2007, SDY270 2009, SDY56 2010)",
"actual_enrollment": 78,
"measurement_technique": "Hemagglutination Inhibition, Transcription profiling by array",
"authors": "Nakaya HI, Hagan T, Duraisingham SS, Lee EK, Kwissa M, Rouphael N, Frasca D, Gersten M, Mehta AK, Gaujoux R, Li GM, Gupta S, Ahmed R, Mulligan MJ, Shen-Orr S, Blomberg BB, Subramaniam S, Pulendran B",
"publication_title": "Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures.",
"pubmed_id": "26682988"
},
{
"study_accession": "SDY1149",
"study_title": "Project 3 - Optimization experiments DCs DV2 and DV4 - MBAA",
"actual_enrollment": 7,
"measurement_technique": "Luminex xMAP, Other",
"authors": "Hamlin RE, Rahman A, Pak TR, Maringer K, Mena I, Bernal-Rubio D, Potla U, Maestre AM, Fredericks AC, Amir ED, Kasarskis A, Ramos I, Merad M, Fernandez-Sesma A",
"publication_title": "High-dimensional CyTOF analysis of dengue virus-infected human DCs reveals distinct viral signatures.",
"pubmed_id": "28679950"
},
{
"study_accession": "SDY1190",
"study_title": "Single-cell RNA-Seq analysis of MTB and DENV immune responses",
"actual_enrollment": 16,
"measurement_technique": "HLA Typing, RNA sequencing",
"authors": "Patil VS, Madrigal A, Schmiedel BJ, Clarke J, O'Rourke P, de Silva AD, Harris E, Peters B, Seumois G, Weiskopf D, Sette A, Vijayanand P",
"publication_title": "Precursors of human CD4+ cytotoxic T lymphocytes identified by single-cell transcriptome analysis.",
"pubmed_id": "29352091"
},
{
"study_accession": "SDY1230",
"study_title": "Immunization Via Mosquito Bite With Radiation-Attenuated Plasmodium Falciparum Sporozoites (IMRAS)",
"actual_enrollment": 54,
"measurement_technique": "RNA sequencing",
"authors": "Hickey B, Teneza-Mora N, Lumsden J, Reyes S, Sedegah M, Garver L, Hollingdale MR, Banania JG, Ganeshan H, Dowler M, Reyes A, Tamminga C, Singer A, Simmons A, Belmonte M, Belmonte A, Huang J, Inoue S, Velasco R, Abot S, Vasquez CS, Guzman I, Wong M, Twomey P, Wojnarski M, Moon J, Alcorta Y, Maiolatesi S, Spring M, Davidson S, Chaudhury S, Villasante E, Richie TL, Epstein JE",
"publication_title": "IMRAS-A clinical trial of mosquito-bite immunization with live, radiation-attenuated P. falciparum sporozoites: Impact of immunization parameters on protective efficacy and generation of a repository of immunologic reagents.",
"pubmed_id": "32555601"
},
{
"study_accession": "SDY1230",
"study_title": "Immunization Via Mosquito Bite With Radiation-Attenuated Plasmodium Falciparum Sporozoites (IMRAS)",
"actual_enrollment": 54,
"measurement_technique": "RNA sequencing",
"authors": "Duffy FJ, Du Y, Carnes J, Epstein JE, Hoffman SL, Abdulla S, Jongo S, Mpina M, Daubenberger C, Aitchison JD, Stuart K",
"publication_title": "Early whole blood transcriptional responses to radiation-attenuated Plasmodium falciparum sporozoite vaccination in malaria naive and malaria pre-exposed adult volunteers.",
"pubmed_id": "34243763"
},
{
"study_accession": "SDY1230",
"study_title": "Immunization Via Mosquito Bite With Radiation-Attenuated Plasmodium Falciparum Sporozoites (IMRAS)",
"actual_enrollment": 54,
"measurement_technique": "RNA sequencing",
"authors": "Neal ML, Duffy FJ, Du Y, Aitchison JD, Stuart KD",
"publication_title": "Preimmunization correlates of protection shared across malaria vaccine trials in adults.",
"pubmed_id": "35031601"
},
{
"study_accession": "SDY1230",
"study_title": "Immunization Via Mosquito Bite With Radiation-Attenuated Plasmodium Falciparum Sporozoites (IMRAS)",
"actual_enrollment": 54,
"measurement_technique": "RNA sequencing",
"authors": "Du Y, Hertoghs N, Duffy FJ, Carnes J, McDermott SM, Neal ML, Schwedhelm KV, McElrath MJ, De Rosa SC, Aitchison JD, Stuart KD",
"publication_title": "Systems analysis of immune responses to attenuated P. falciparum malaria sporozoite vaccination reveals excessive inflammatory signatures correlating with impaired immunity.",
"pubmed_id": "35108339"
},
{
"study_accession": "SDY1230",
"study_title": "Immunization Via Mosquito Bite With Radiation-Attenuated Plasmodium Falciparum Sporozoites (IMRAS)",
"actual_enrollment": 54,
"measurement_technique": "RNA sequencing",
"authors": "Duffy FJ, Hertoghs N, Du Y, Neal ML, Oyong D, McDermott S, Minkah N, Carnes J, Schwedhelm KV, McElrath MJ, De Rosa SC, Newell E, Aitchison JD, Stuart K",
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"authors": "Oyong DA, Duffy FJ, Neal ML, Du Y, Carnes J, Schwedhelm KV, Hertoghs N, Jun SH, Miller H, Aitchison JD, De Rosa SC, Newell EW, McElrath MJ, McDermott SM, Stuart KD",
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"authors": "Burel JG, Lindestam Arlehamn CS, Khan N, Seumois G, Greenbaum JA, Taplitz R, Gilman RH, Saito M, Vijayanand P, Sette A, Peters B",
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"authors": "Qi Q, Cavanagh MM, Le Saux S, Wagar LE, Mackey S, Hu J, Maecker H, Swan GE, Davis MM, Dekker CL, Tian L, Weyand CM, Goronzy JJ",
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"authors": "Zhao Y, Amodio M, Vander Wyk B, Gerritsen B, Kumar MM, van Dijk D, Moon K, Wang X, Malawista A, Richards MM, Cahill ME, Desai A, Sivadasan J, Venkataswamy MM, Ravi V, Fikrig E, Kumar P, Kleinstein SH, Krishnaswamy S, Montgomery RR",
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"authors": "Miron M, Kumar BV, Meng W, Granot T, Carpenter DJ, Senda T, Chen D, Rosenfeld AM, Zhang B, Lerner H, Friedman AL, Hershberg U, Shen Y, Rahman A, Luning Prak ET, Farber DL",
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"authors": "Konstorum A, Mohanty S, Zhao Y, Melillo A, Vander Wyk B, Nelson A, Tsang S, Blevins TP, Belshe RB, Chawla DG, Rondina MT, Gill TM, Montgomery RR, Allore HG, Kleinstein SH, Shaw AC",
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"authors": "Lee AH, Shannon CP, Amenyogbe N, Bennike TB, Diray-Arce J, Idoko OT, Gill EE, Ben-Othman R, Pomat WS, van Haren SD, Cao KL, Cox M, Darboe A, Falsafi R, Ferrari D, Harbeson DJ, He D, Bing C, Hinshaw SJ, Ndure J, Njie-Jobe J, Pettengill MA, Richmond PC, Ford R, Saleu G, Masiria G, Matlam JP, Kirarock W, Roberts E, Malek M, Sanchez-Schmitz G, Singh A, Angelidou A, Smolen KK, Brinkman RR, Ozonoff A, Hancock REW, van den Biggelaar AHJ, Steen H, Tebbutt SJ, Kampmann B, Levy O, Kollmann TR",
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"authors": "Brodin P, Jojic V, Gao T, Bhattacharya S, Angel CJ, Furman D, Shen-Orr S, Dekker CL, Swan GE, Butte AJ, Maecker HT, Davis MM",
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"authors": "Amir ED, Lee B, Badoual P, Gordon M, Guo XV, Merad M, Rahman AH",
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"authors": "Fenutria R, Maringer K, Potla U, Bernal-Rubio D, Evans MJ, Harris E, Rahman AH, Fernandez-Sesma A, Ramos I",
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{
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"measurement_technique": "Flow Cytometry, Luminex xMAP, Mass Spectrometry, Other",
"authors": "Idoko OT, Smolen KK, Wariri O, Imam A, Shannon CP, Dibassey T, Diray-Arce J, Darboe A, Strandmark J, Ben-Othman R, Odumade OA, McEnaney K, Amenyogbe N, Pomat WS, van Haren S, Sanchez-Schmitz G, Brinkman RR, Steen H, Hancock REW, Tebbutt SJ, Richmond PC, van den Biggelaar AHJ, Kollmann TR, Levy O, Ozonoff A, Kampmann B",
"publication_title": "Clinical Protocol for a Longitudinal Cohort Study Employing Systems Biology to Identify Markers of Vaccine Immunogenicity in Newborn Infants in The Gambia and Papua New Guinea.",
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"study_title": "Modified CyTOF Helios Injector Can Improve Data Quality",
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"authors": "Lee BH, Kelly G, Bradford S, Davila M, Guo XV, Amir ED, Thrash EM, Solga MD, Lannigan J, Sellers B, Candia J, Tsang J, Montgomery RR, Tamaki SJ, Sigdel TK, Sarwal MM, Lanier LL, Tian Y, Kim C, Hinz D, Peters B, Sette A, Rahman AH",
"publication_title": "A Modified Injector and Sample Acquisition Protocol Can Improve Data Quality and Reduce Inter-Instrument Variability of the Helios Mass Cytometer.",
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"study_title": "Licensed BCG formulations differ markedly in innate immune activation",
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"authors": "Angelidou A, Conti MG, Diray-Arce J, Benn CS, Shann F, Netea MG, Liu M, Potluri LP, Sanchez-Schmitz G, Husson R, Ozonoff A, Kampmann B, van Haren SD, Levy O",
"publication_title": "Licensed Bacille Calmette-Guerin (BCG) formulations differ markedly in bacterial viability, RNA content and innate immune activation.",
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"authors": "Pickering H, Sen S, Arakawa-Hoyt J, Ishiyama K, Sun Y, Parmar R, Ahn RS, Sunga G, Llamas M, Hoffmann A, Deng M, Bunnapradist S, Schaenman JM, Gjertson DW, Rossetti M, Lanier LL, Reed EF",
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"authors": "Ahn R, Schaenman J, Qian Z, Pickering H, Groysberg V, Rossetti M, Llamas M, Hoffmann A, Gjertson D, Deng M, Bunnapradist S, Reed EF",
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"authors": "Grifoni A, Weiskopf D, Ramirez SI, Mateus J, Dan JM, Moderbacher CR, Rawlings SA, Sutherland A, Premkumar L, Jadi RS, Marrama D, de Silva AM, Frazier A, Carlin AF, Greenbaum JA, Peters B, Krammer F, Smith DM, Crotty S, Sette A",
"publication_title": "Targets of T Cell Responses to SARS-CoV-2 Coronavirus in Humans with COVID-19 Disease and Unexposed Individuals.",
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{
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"study_title": "An Inflammatory Cytokine Signature Predicts Covid-19 Severity And Survival",
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"measurement_technique": "ELISA",
"authors": "Del Valle DM, Kim-Schulze S, Hsin-Hui H, Beckmann ND, Nirenberg S, Wang B, Lavin Y, Swartz T, Madduri D, Stock A, Marron T, Xie H, Patel MK, van Oekelen O, Rahman A, Kovatch P, Aberg J, Schadt E, Jagannath S, Mazumdar M, Charney A, Firpo-Betancourt A, Mendu DR, Jhang J, Reich D, Sigel K, Cordon-Cardo C, Feldmann M, Parekh S, Merad M, Gnjatic S",
"publication_title": "An inflammatory cytokine signature helps predict COVID-19 severity and death.",
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{
"study_accession": "SDY1662",
"study_title": "An Inflammatory Cytokine Signature Predicts Covid-19 Severity And Survival",
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"measurement_technique": "ELISA",
"authors": "Del Valle DM, Kim-Schulze S, Huang HH, Beckmann ND, Nirenberg S, Wang B, Lavin Y, Swartz TH, Madduri D, Stock A, Marron TU, Xie H, Patel M, Tuballes K, Van Oekelen O, Rahman A, Kovatch P, Aberg JA, Schadt E, Jagannath S, Mazumdar M, Charney AW, Firpo-Betancourt A, Mendu DR, Jhang J, Reich D, Sigel K, Cordon-Cardo C, Feldmann M, Parekh S, Merad M, Gnjatic S",
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"measurement_technique": "CyTOF, ELISA, Flow Cytometry, Other, Q-PCR, RNA sequencing",
"authors": "Arunachalam PS, Wimmers F, Mok CKP, Perera RAPM, Scott M, Hagan T, Sigal N, Feng Y, Bristow L, Tak-Yin Tsang O, Wagh D, Coller J, Pellegrini KL, Kazmin D, Alaaeddine G, Leung WS, Chan JMC, Chik TSH, Choi CYC, Huerta C, Paine McCullough M, Lv H, Anderson E, Edupuganti S, Upadhyay AA, Bosinger SE, Maecker HT, Khatri P, Rouphael N, Peiris M, Pulendran B",
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"authors": "Rydyznski Moderbacher C, Ramirez SI, Dan JM, Grifoni A, Hastie KM, Weiskopf D, Belanger S, Abbott RK, Kim C, Choi J, Kato Y, Crotty EG, Kim C, Rawlings SA, Mateus J, Tse LPV, Frazier A, Baric R, Peters B, Greenbaum J, Ollmann Saphire E, Smith DM, Sette A, Crotty S",
"publication_title": "Antigen-Specific Adaptive Immunity to SARS-CoV-2 in Acute COVID-19 and Associations with Age and Disease Severity.",
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{
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"authors": "Weisberg SP, Connors TJ, Zhu Y, Baldwin MR, Lin WH, Wontakal S, Szabo PA, Wells SB, Dogra P, Gray J, Idzikowski E, Stelitano D, Bovier FT, Davis-Porada J, Matsumoto R, Poon MML, Chait M, Mathieu C, Horvat B, Decimo D, Hudson KE, Zotti FD, Bitan ZC, La Carpia F, Ferrara SA, Mace E, Milner J, Moscona A, Hod E, Porotto M, Farber DL",
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{
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"study_title": "Longitudinal profiling of respiratory and systemic immune responses in severe COVID-19",
"actual_enrollment": 38,
"measurement_technique": "Flow Cytometry",
"authors": "Szabo PA, Dogra P, Gray JI, Wells SB, Connors TJ, Weisberg SP, Krupska I, Matsumoto R, Poon MML, Idzikowski E, Morris SE, Pasin C, Yates AJ, Ku A, Chait M, Davis-Porada J, Guo XV, Zhou J, Steinle M, Mackay S, Saqi A, Baldwin MR, Sims PA, Farber DL",
"publication_title": "Longitudinal profiling of respiratory and systemic immune responses reveals myeloid cell-driven lung inflammation in severe COVID-19.",
"pubmed_id": "33765436"
},
{
"study_accession": "SDY1773",
"study_title": "Human plasmacytoid dendritic cells mount a distinct antiviral response to virus-infected cells",
"actual_enrollment": 85,
"measurement_technique": "CyTOF, Flow Cytometry, RNA sequencing",
"authors": "Yun TJ, Igarashi S, Zhao H, Perez OA, Pereira MR, Zorn E, Shen Y, Goodrum F, Rahman A, Sims PA, Farber DL, Reizis B",
"publication_title": "Human plasmacytoid dendritic cells mount a distinct antiviral response to virus-infected cells.",
"pubmed_id": "33811059"
},
{
"study_accession": "SDY1885",
"study_title": "Heterogeneity of human anti-viral immunity shaped by virus, tissue, age, and sex",
"actual_enrollment": 59,
"measurement_technique": "Flow Cytometry, Luminex xMAP, RNA sequencing",
"authors": "Poon MML, Byington E, Meng W, Kubota M, Matsumoto R, Grifoni A, Weiskopf D, Dogra P, Lam N, Szabo PA, Ural BB, Wells SB, Rosenfeld AM, Brusko MA, Brusko TM, Connors TJ, Sette A, Sims PA, Luning Prak ET, Shen Y, Farber DL",
"publication_title": "Heterogeneity of human anti-viral immunity shaped by virus, tissue, age, and sex.",
"pubmed_id": "34852222"
},
{
"study_accession": "SDY1968",
"study_title": "Metabolomic and transcriptomic signatures of influenza vaccine response in healthy young and older adults",
"actual_enrollment": 39,
"measurement_technique": "",
"authors": "Chou CH, Mohanty S, Kang HA, Kong L, Avila-Pacheco J, Joshi SR, Ueda I, Devine L, Raddassi K, Pierce K, Jeanfavre S, Bullock K, Meng H, Clish C, Santori FR, Shaw AC, Xavier RJ",
"publication_title": "Metabolomic and transcriptomic signatures of influenza vaccine response in healthy young and older adults.",
"pubmed_id": "35996998"
},
{
"study_accession": "SDY1991",
"study_title": "Role of Transcriptomics of Acute DENV-Specific CD8+ T Cells in Disease Severity",
"actual_enrollment": 40,
"measurement_technique": "RNA sequencing",
"authors": "Grifoni A, Voic H, Yu ED, Mateus J, Yan Fung KM, Wang A, Seumois G, De Silva AD, Tennekon R, Premawansa S, Premawansa G, Tippalagama R, Wijewickrama A, Chawla A, Greenbaum J, Peters B, Pandurangan V, Weiskopf D, Sette A",
"publication_title": "Transcriptomics of Acute DENV-Specific CD8+ T Cells Does Not Support Qualitative Differences as Drivers of Disease Severity.",
"pubmed_id": "35455361"
},
{
"study_accession": "SDY1995",
"study_title": "Association of CD4+ CD8+ T cells with risk of plasma leakage in Dengue disease",
"actual_enrollment": 86,
"measurement_technique": "RNA sequencing",
"authors": "Yu ED, Wang H, da Silva Antunes R, Tian Y, Tippalagama R, Alahakoon SU, Premawansa G, Wijewickrama A, Premawansa S, De Silva AD, Frazier A, Grifoni A, Sette A, Weiskopf D",
"publication_title": "A Population of CD4+CD8+ Double-Positive T Cells Associated with Risk of Plasma Leakage in Dengue Viral Infection.",
"pubmed_id": "35062294"
}
]